txid117571[Organism:exp] AND (complex_dna[filt]) - Structure - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 1 to 20 of 3504

<< First< Prev

Page of 176

Select item 2297601.

Molecular Structure Image for 8BZ1

RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W)[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, unidentified adenovirus, Xenopus laevis

Proteins:: 26
Nucleic acids:: (DNA)
Chemicals:: 10
modified:: 2023-05-23

MMDB ID:: 229760
PDB ID:: 8BZ1

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2297592.

Molecular Structure Image for 8BYQ

RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W)[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa, unidentified adenovirus, Xenopus laevis

Proteins:: 38
Nucleic acids:: (DNA)
Chemicals:: 18
modified:: 2023-05-23

MMDB ID:: 229759
PDB ID:: 8BYQ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2297583.

Molecular Structure Image for 8BVW

RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)[TRANSCRIPTION]

Taxonomy:: Homo sapiens, Sus scrofa, unidentified adenovirus, Xenopus laevis

Proteins:: 40
Nucleic acids:: (DNA)
Chemicals:: 19
modified:: 2023-05-30

MMDB ID:: 229758
PDB ID:: 8BVW

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2281514.

Molecular Structure Image for 8G86

Human Oct4 bound to nucleosome with human nMatn1 sequence (focused refinement of nucleosome)[DNA BINDING PROTEIN/DNA]

Taxonomy:: Xenopus laevis, Xenopus laevis laevis, Homo sapiens

Proteins:: 8
Nucleic acids:: (DNA)
modified:: 2023-07-27

MMDB ID:: 228151
PDB ID:: 8G86

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 2226215.

Molecular Structure Image for 8GXS

PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state[TRANSCRIPTION]

Taxonomy:: synthetic construct, Homo sapiens, Xenopus laevis, Sus scrofa

Proteins:: 83
Nucleic acids:: (DNA)
Chemicals:: 21
modified:: 2022-11-02

MMDB ID:: 222621
PDB ID:: 8GXS

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2226206.

Molecular Structure Image for 8GXQ

PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state[TRANSCRIPTION]

Taxonomy:: synthetic construct, Homo sapiens, Xenopus laevis, Sus scrofa

Proteins:: 83
Nucleic acids:: (DNA)
Chemicals:: 21
modified:: 2022-11-02

MMDB ID:: 222620
PDB ID:: 8GXQ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2217297.

Molecular Structure Image for 7UND

Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38)[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, synthetic construct, Xenopus laevis

Proteins:: 30
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 10
modified:: 2022-10-19

MMDB ID:: 221729
PDB ID:: 7UND

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2217288.

Molecular Structure Image for 7UNC

Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, synthetic construct, Xenopus laevis

Proteins:: 29
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2022-10-19

MMDB ID:: 221728
PDB ID:: 7UNC

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 2077189.

Molecular Structure Image for 7OPD

Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5)[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, Mus musculus

Proteins:: 25
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2021-11-02

MMDB ID:: 207718
PDB ID:: 7OPD

View in iCn3D PubMed Proteins PubChem Compound

Select item 20762710.

Molecular Structure Image for 7OPC

Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4)[TRANSCRIPTION]

Taxonomy:: Sus scrofa, Homo sapiens, Mus musculus

Proteins:: 25
Nucleic acids:: (2 DNA, 1 RNA)
Chemicals:: 9
modified:: 2021-11-02

MMDB ID:: 207627
PDB ID:: 7OPC

View in iCn3D PubMed Proteins Conserved Domains PubChem Compound

Select item 19949911.

Molecular Structure Image for 7CRR

Native NSD3 bound to 187-bp nucleosome[GENE REGULATION]

Taxonomy:: Xenopus laevis, Xenopus tropicalis, synthetic construct, Homo sapiens

Proteins:: 9
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2021-03-05

MMDB ID:: 199499
PDB ID:: 7CRR

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 19783612.

Molecular Structure Image for 7CRQ

NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)[GENE REGULATION]

Taxonomy:: Xenopus laevis, Xenopus tropicalis, Homo sapiens

Proteins:: 10
Nucleic acids:: (DNA)
Chemicals:: 8
modified:: 2021-03-05

MMDB ID:: 197836
PDB ID:: 7CRQ

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 19783513.

Molecular Structure Image for 7CRP

NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (1:1 binding mode)[GENE REGULATION]

Taxonomy:: Xenopus laevis, Xenopus tropicalis, Homo sapiens

Proteins:: 9
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2021-03-05

MMDB ID:: 197835
PDB ID:: 7CRP

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 19783414.

Molecular Structure Image for 7CRO

NSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP[GENE REGULATION]

Taxonomy:: Xenopus laevis, Xenopus tropicalis, Homo sapiens

Proteins:: 9
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2021-03-05

MMDB ID:: 197834
PDB ID:: 7CRO

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 16551115.

Molecular Structure Image for 6FTX

Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome[MOTOR PROTEIN]

Taxonomy:: Petromyzon marinus, Xenopus laevis, Xenopus tropicalis, synthetic construct, Homo sapiens, Saccharomyces cerevisiae

Proteins:: 11
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2018-10-22

MMDB ID:: 165511
PDB ID:: 6FTX

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 9582116.

Molecular Structure Image for 4A0L

Structure of DDB1-DDB2-CUL4B-RBX1 bound to a 12 bp abasic site containing DNA-duplex[LIGASE/DNA-BINDING PROTEIN/DNA]

Taxonomy:: Homo sapiens, Danio rerio, Mus musculus, synthetic construct

Proteins:: 4
Nucleic acids:: (DNA)
modified:: 2023-12-21

MMDB ID:: 95821
PDB ID:: 4A0L

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 9582017.

Molecular Structure Image for 4A0K

STRUCTURE OF DDB1-DDB2-CUL4A-RBX1 BOUND TO A 12 BP ABASIC SITE CONTAINING DNA-DUPLEX[LIGASE/DNA-BINDING PROTEIN/DNA]

Taxonomy:: Homo sapiens, Mus musculus, Danio rerio, synthetic construct

Proteins:: 4
Nucleic acids:: (DNA)
modified:: 2023-12-21

MMDB ID:: 95820
PDB ID:: 4A0K

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 7462118.

Molecular Structure Image for 2F8N

2.9 Angstrom X-ray structure of hybrid macroH2A nucleosomes[STRUCTURAL PROTEIN/DNA]

Taxonomy:: Xenopus laevis, Mus musculus, Homo sapiens

Proteins:: 8
Nucleic acids:: (DNA)
modified:: 2023-08-31

MMDB ID:: 74621
PDB ID:: 2F8N

View in iCn3D Similar Structures Proteins Conserved Domains

Select item 7203619.

Molecular Structure Image for 1F66

2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z[STRUCTURAL PROTEIN/DNA]

Taxonomy:: Xenopus laevis, Mus musculus, Homo sapiens, synthetic construct

Proteins:: 8
Nucleic acids:: (DNA)
Chemicals:: 15
modified:: 2024-02-12

MMDB ID:: 72036
PDB ID:: 1F66

View in iCn3D Similar Structures Proteins Conserved Domains PubChem Compound

Select item 24598420.

Molecular Structure Image for 9BDX

NF-kappaB RelA homo-dimer bound to CG-centric kappaB DNA[DNA BINDING PROTEIN/DNA]

Taxonomy:: Mus musculus, Homo sapiens

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-04-24

MMDB ID:: 245984
PDB ID:: 9BDX

View in iCn3D Proteins

<< First< Prev

Page of 176

Supplemental Content

Filter your results:

Manage Filters

Refine your results

• What's this?

Protein Domain Families

Families (2,765)
Structures with functionally specific protein families
Superfamilies (2,972)
Structures with evolutionary related protein superfamilies

Complexes

Protein-Protein (1,779)
Structures containing multiple proteins
Protein-DNA (3,504)
Structures containing proteins and DNA
Protein-RNA (159)
Structures containing proteins and RNA
Protein-Chemical (2,574)
Structures containing proteins and chemicals

Literature

PubMed (3,210)
Structures with corresponding literature
PMC (1,369)
Structures with corresponding free full text literature

Taxonomy (3,498)
Structure source organisms

Find related data

Search details

Recent activity

Clear Turn Off Turn On

txid117571[Organism:exp] AND (complex_dna[filt]) (3504)
Structure

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Domains & Structures > Structure (Molecular Modeling Database)